Update the system (apt) Keep a HolyCloud Ubuntu/Debian VPS up to date with apt: security updates, kernel, planned reboots, and automation. ~6 min read Beginner #apt #updates #security #debian #ubuntu Update the system (apt) Outdated packages expose your HolyCloud Linux VPS to known vulnerabilities. On Debian and Ubuntu, apt manages installation and updates. This guide covers a safe manual cycle, automatic security updates, and reboots after kernel updates. Prerequisites HolyCloud VPS Ubuntu 22.04/24.04 or Debian 12 sudo or root access Snapshot or backup before a major version jump (e.g. release-upgrade) Maintenance window if critical services run (databases, e-commerce) Tip: run apt update && apt upgrade at least weekly on an Internet-exposed server. Step 1: current state and mirrors cat /etc/os-release uname -r apt-cache policy Refresh the package list: sudo apt update If apt update fails (slow mirror), check /etc/apt/sources.list and connectivity: ping -c 2 deb.debian.org Step 2: see available updates apt list --upgradable Security updates only (preview): sudo apt upgrade --dry-run grep -i security /var/log/apt/history.log | tail -5 Step 3: apply updates (standard method) sudo apt upgrade -y To include recommended dependency changes (new packages, removals): sudo apt full-upgrade -y Remove unused packages: sudo apt autoremove -y sudo apt autoclean Step 4: automatic security updates (unattended-upgrades) Installation: sudo apt install -y unattended-upgrades apt-listchanges sudo dpkg-reconfigure -plow unattended-upgrades Check configuration: cat /etc/apt/apt.conf.d/50unattended-upgrades | head -40 sudo systemctl status unattended-upgrades Dry run: sudo unattended-upgrade --dry-run --debug Step 5: kernel and reboot After updating linux-image-*, a reboot loads the new kernel: uname -r ls /boot/vmlinuz-* 2>/dev/null | tail -3 [ -f /var/run/reboot-required ] && cat /var/run/reboot-required Schedule reboot: sudo reboot After SSH reconnect: uptime uname -r Step 6: minor version upgrade (optional) Ubuntu LTS to next point release: sudo apt update sudo apt install -y update-manager-core sudo do-release-upgrade Debian (stable → next stable): read Debian documentation before do-release-upgrade; prefer a new HolyCloud instance for major production jumps. Step 7: logs and rollback apt history: grep -E 'Start-Date|Commandline' /var/log/apt/history.log | tail -20 HolyCloud snapshot or Borg/rsync backup before major full-upgrade — on regression, restore from the panel. Verification sudo apt update apt list --upgradable [ ! -f /var/run/reboot-required ] && echo "Pas de reboot requis" || echo "Reboot requis" systemctl is-active unattended-upgrades 2>/dev/null || echo "unattended-upgrades non installé" All critical packages up to date: apt list --upgradable should be empty (or only voluntary backports). HolyCloud help E: Unable to locate package: wrong sources.list or EOL distribution — provide lsb_release -a dpkg was interrupted: sudo dpkg --configure -a then sudo apt -f install Disk full during upgrade: df -h, sudo apt clean HolyCloud support: apt update output, df -h, OS version before/after incident Continue reading Previous article Timezone and NTP Read